STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_6600020D-arabinono-lactone oxidase. (617 aa)    
Predicted Functional Partners:
BKCO1_28000118
Calcium homeostasis protein.
  
 
 0.739
BKCO1_8700028
Cytochrome b2.
   
 0.672
BKCO1_4700077
Mitochondrial cytochrome b2.
   
 0.672
BKCO1_4300095
Fmn-dependent dehydrogenase.
   
 0.672
BKCO1_200078
L-lactate dehydrogenase.
   
 0.672
BKCO1_5700024
N-acetylglucosaminyl-phosphatidylinositol de-n-acetylase.
     
 0.643
BKCO1_3600072
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.598
BKCO1_1000499
Acyltransferase.
    
 0.574
BKCO1_4000027
Nitrate reductase.
    
 0.552
BKCO1_23000124
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.552
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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