STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_690002Chl4 family chromosome segregation protein. (468 aa)    
Predicted Functional Partners:
BKCO1_4700035
Clptm1 domain protein.
    
 
 0.948
BKCO1_580009
Mis12-mtw1 family protein.
    
 
 0.824
BKCO1_6700022
Histone H3.
    
 
 0.751
BKCO1_8000253
Histone 3.
    
 
 0.751
BKCO1_4700038
Mis6 domain-containing protein.
  
 
 
 0.717
BKCO1_20000131
Mitotic spindle checkpoint component mad2.
    
   0.712
BKCO1_3700038
Spindle assembly checkpoint component mad1.
    
   0.695
BKCO1_5800014
Tetratricopeptide repeat domain-containing protein.
    
 
 0.681
BKCO1_1400037
Tat pathway signal sequence.
    
 
 0.618
BKCO1_800020
Grf zinc finger domain-containing protein.
    
 
 0.618
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.