STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_7200018Integral membrane mpv17 pmp22 family; Belongs to the peroxisomal membrane protein PXMP2/4 family. (206 aa)    
Predicted Functional Partners:
BKCO1_2900099
Pex19 family protein.
    
 0.742
BKCO1_300028
Peroxisomal membrane protein.
     
 0.665
BKCO1_5400038
Peroxisomal targeting signal receptor.
     
 0.648
BKCO1_7100032
Peroxisomal membrane protein.
     
 0.646
BKCO1_6200015
Peroxisomal biogenesis factor.
     
 0.624
BKCO1_23000111
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
     
 0.593
BKCO1_8000231
Nuclear serine protease 2 nma111.
    
  0.592
BKCO1_19000247
Peroxisome biosynthesis protein (Peroxin-10).
     
 0.577
BKCO1_3200052
Zinc finger ring-type protein.
     
 0.577
BKCO1_26000107
Aldehyde dehydrogenase.
   
 
  0.516
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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