STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_5600064Subtilisin-like serine protease. (397 aa)    
Predicted Functional Partners:
BKCO1_5300090
Glycosyltransferase family 1 protein.
   
 0.863
BKCO1_5500011
Adenosine kinase.
    
 0.756
BKCO1_30000101
Small monomeric gtpase.
    
 0.749
BKCO1_1150003
Udp-n-acetylglucosamine-1-p transferase.
    
 0.719
BKCO1_800072
Beta-mannosyltransferase.
    
 0.625
BKCO1_4500081
Riboflavin biosynthesis protein.
    
 0.606
BKCO1_4200029
Family carbohydrate kinase.
    
 0.606
BKCO1_3400083
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.606
BKCO1_2900032
Alpha-mannosyltransferase alg11.
    
 0.541
BKCO1_5800038
Low-density lipoprotein receptor ywtd.
    
  0.520
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.