STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_5900016Proteasome regulatory particle subunit. (400 aa)    
Predicted Functional Partners:
BKCO1_7100046
26s proteasome regulatory subunit s5a.
   
 0.999
BKCO1_5900026
26s proteasome non-atpase regulatory subunit 11.
   
 0.999
BKCO1_4400091
26s proteasome regulatory subunit rpn-8.
   
 0.999
BKCO1_7000109
26s proteasome non-atpase regulatory subunit 12.
   
 0.999
BKCO1_5000217
26s protease regulatory subunit 6b; Belongs to the AAA ATPase family.
   
 0.999
BKCO1_3000194
26s protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 0.999
BKCO1_2000255
26s protease regulatory subunit 6a; Belongs to the AAA ATPase family.
   
 0.999
BKCO1_1000269
26s proteasome regulatory subunit.
   
 0.999
BKCO1_2100043
Proteasome regulatory particle subunit.
   
 0.999
BKCO1_6200021
Proteasome regulatory particle subunit.
   
 0.998
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.