STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_4300083Sexual development activator. (599 aa)    
Predicted Functional Partners:
BKCO1_11000135
Uncharacterized protein.
    
 0.847
BKCO1_3600086
Developmental regulator.
  
 
 
0.633
BKCO1_4500039
Developmental regulatory protein.
    
 0.590
BKCO1_10100014
Methyltransferase.
    
 
 0.570
BKCO1_5700073
C2h2 transcription factor.
    
 
 0.570
BKCO1_8000164
Apses transcription factor.
    
 
 0.553
BKCO1_7000107
Wd repeat protein.
   
 0.548
BKCO1_18000106
Pre-rrna-processing protein ipi1.
    
 0.536
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.518
BKCO1_17000131
Transcription factor.
      
 0.491
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.