STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_4700080C6 transcription factor. (961 aa)    
Predicted Functional Partners:
BKCO1_9900021
Malate synthase; Belongs to the malate synthase family.
   
 
 0.780
BKCO1_2900048
Alanine-glyoxylate aminotransferase.
  
 
 0.693
BKCO1_37000138
Citrate synthase; Belongs to the citrate synthase family.
  
 0.655
BKCO1_4000088
Citrate synthase; Belongs to the citrate synthase family.
  
 0.655
BKCO1_1800041
Citrate synthase; Belongs to the citrate synthase family.
  
 0.655
BKCO1_4700059
Citrate synthase; Belongs to the citrate synthase family.
  
 0.655
BKCO1_3600072
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
  0.601
BKCO1_1060005
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
  
 0.598
BKCO1_350002
Aconitate hydratase.
  
 0.598
BKCO1_2900077
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.598
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.