STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_5100076Nadph2:quinone reductase. (369 aa)    
Predicted Functional Partners:
BKCO1_31000110
Sulfite oxidase.
     
 0.714
BKCO1_330003
Sulfite oxidase.
     
 0.714
BKCO1_4000027
Nitrate reductase.
     
 0.662
BKCO1_23000124
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.662
BKCO1_15000153
Short chain dehydrogenase.
  
 0.564
BKCO1_7500037
Polyketide synthase.
    
  0.508
BKCO1_7500021
Polyketide synthase.
    
  0.508
BKCO1_410008
Polyketide synthase.
    
  0.508
BKCO1_19000199
Thioesterase family protein.
    
  0.508
BKCO1_9000177
Thioesterase domain containing protein.
    
  0.508
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.