STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_4400011Lon protease. (291 aa)    
Predicted Functional Partners:
BKCO1_7100034
40s ribosomal protein s13; Belongs to the universal ribosomal protein uS15 family.
   
 0.996
BKCO1_2000063
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.996
BKCO1_1200051
40s ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
   
 0.996
BKCO1_2000237
40s ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family.
   
 0.996
BKCO1_4000038
40s ribosomal protein s19.
   
 0.996
BKCO1_6600023
40s ribosomal protein s18; Belongs to the universal ribosomal protein uS13 family.
   
 0.996
BKCO1_5300093
40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family.
   
 0.996
BKCO1_4300062
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.996
BKCO1_28000114
40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
   
 0.996
BKCO1_700046
40s ribosomal protein s9; Belongs to the universal ribosomal protein uS4 family.
   
 0.996
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.