STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_4300070Phenylalanyl-trna synthetase. (508 aa)    
Predicted Functional Partners:
BKCO1_1200056
Phenylalanyl-trna beta subunit.
  
 0.999
BKCO1_1000273
Phenylalanyl-trna synthetase alpha chain.
   
 
 0.929
BKCO1_3100028
Mitochondrial 54s ribosomal protein 47; Belongs to the universal ribosomal protein uL16 family.
 
 
 0.801
BKCO1_1000144
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.759
BKCO1_9000122
Aspartyl-trna synthetase.
  
  
 0.750
BKCO1_2700051
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.727
BKCO1_2800046
Tyrosine--tRNA ligase.
  
  
 0.724
BKCO1_510001
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
  
 0.716
BKCO1_7100027
Valyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.708
BKCO1_2500023
Transmembrane protein.
  
 
 0.696
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.