STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_330008Lon protease like peroxisomal. (605 aa)    
Predicted Functional Partners:
BKCO1_400025
Cross-pathway control protein 1.
    
 0.866
BKCO1_26000111
Mitochondrial 54s ribosomal protein 16; Belongs to the universal ribosomal protein uL6 family.
    
  0.707
BKCO1_21000146
60s ribosomal protein l9.
    
  0.694
BKCO1_6700052
Striatin pro11.
    
 0.636
BKCO1_1000204
Mitochondrial 37s ribosomal protein mrps12.
   
 
 0.631
BKCO1_20000140
Ribosomal protein s15.
   
   0.620
BKCO1_4000188
Mitochondrial ribosomal protein subunit s18.
   
 
 0.610
BKCO1_100072
Uncharacterized protein.
   
  0.607
BKCO1_1000252
50s ribosomal protein 27.
   
 
 0.605
BKCO1_6000232
Mitochondrial 37s ribosomal protein mrps5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.604
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.