STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_3400013Phosphoribosylformylglycinamidine synthase. (1376 aa)    
Predicted Functional Partners:
BKCO1_4300030
Phosphoribosylglycinamide formyltransferase.
  
 
 0.995
BKCO1_800066
Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily.
  
 0.991
BKCO1_18000142
Amidophosphoribosyltransferase.
  
 0.991
BKCO1_3000126
Bifunctional purine biosynthetic protein.
 
 
 0.989
BKCO1_38000107
Bifunctional purine biosynthesis protein ade17.
  
 
 0.979
BKCO1_5800066
Urease accessory protein.
  
 
 0.975
BKCO1_36000110
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
  
 0.908
BKCO1_2200064
Formate-tetrahydrofolate ligase.
  
 
 0.907
BKCO1_1000178
Gmp synthase.
  
  
 0.872
BKCO1_1300028
Methionyl-trna formyltransferase.
     
 0.856
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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