STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_3700015Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (688 aa)    
Predicted Functional Partners:
BKCO1_20000144
Dor1-like family protein.
  
 0.995
BKCO1_1100099
Vps51 vps67.
   
 0.994
BKCO1_2100099
Golgi complex component cog3.
   
 0.993
BKCO1_800021
Glycoside hydrolase family 125 protein.
   
 0.991
BKCO1_3000049
Conserved oligomeric golgi complex subunit 2 protein.
    
 0.986
BKCO1_1100032
Uncharacterized protein.
    
 0.966
BKCO1_5000218
Golgi transport complex component cog5.
    
 0.917
BKCO1_1000411
Gtp-binding protein ryh1.
   
 0.916
BKCO1_2000056
Snare complex subunit; Belongs to the syntaxin family.
    
 0.915
BKCO1_6000193
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.903
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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