STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_25000122Nacht and ankyrin domain protein. (322 aa)    
Predicted Functional Partners:
BKCO1_3200087
Ash2-trithorax family protein.
   
 
 0.827
BKCO1_17000106
Set1 complex component swd1.
    
 
 0.820
BKCO1_510005
Wd repeat protein.
    
 
 0.746
BKCO1_4200021
Peptidase family m20 m25 m40 protein.
   
 
 0.643
BKCO1_3600037
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 
 0.643
BKCO1_8400031
Rsc complex subunit.
    
 
 0.602
BKCO1_2100018
Actin actin-like protein; Belongs to the actin family.
    
 
 0.583
BKCO1_10500014
Swi-snf complex subunit.
    
 
 0.577
BKCO1_29000100
Sumo-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.545
BKCO1_600089
Snf5-domain-containing protein.
    
 
 0.537
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.