STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_2400098Mitochondrial import receptor subunit tom40. (356 aa)    
Predicted Functional Partners:
BKCO1_2400099
Mitochondrial import receptor subunit tom22.
   
 0.997
BKCO1_1000412
Mitochondrial import receptor subunit.
   
 0.987
BKCO1_20000108
Mitochondrial import receptor subunit tom-70.
    
 0.982
BKCO1_2000190
Outer membrane protein.
    
 0.971
BKCO1_9000111
Mitochondrial import receptor subunit.
    
 0.965
BKCO1_1110005
Outer mitochondrial membrane protein porin.
    
 0.960
BKCO1_5800018
Mitochondrial outer membrane protein.
    
 0.948
BKCO1_10000171
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.942
BKCO1_1500078
Mitochondrial import inner membrane translocase subunit tim10.
   
 0.860
BKCO1_13000101
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.853
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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