STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_16000106Glycoside hydrolase family 55 protein. (840 aa)    
Predicted Functional Partners:
BKCO1_31000107
Exo-beta-protein.
  
  
 
0.900
BKCO1_1000099
Glycoside hydrolase family 5 protein.
    
 0.895
BKCO1_660003
Glycoside hydrolase family 55 protein.
  
  
 
0.894
BKCO1_23000137
Glucan-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.893
BKCO1_2300023
Glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.893
BKCO1_400054
Glucan-beta-glucosidase; Belongs to the glycosyl hydrolase 17 family.
    
  0.893
BKCO1_4100059
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
 0.796
BKCO1_1800057
Glycoside hydrolase family 3 protein.
    
 0.796
BKCO1_5600061
Glycoside hydrolase family 3 protein.
    
 0.794
BKCO1_3300019
Glycoside hydrolase family 3 protein.
    
 0.794
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.