STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_180003Glutamine-serine-proline rich protein. (429 aa)    
Predicted Functional Partners:
BKCO1_3000099
Uba ts-n domain protein.
    
 0.898
BKCO1_650009
Ankyrin.
  
 0.864
BKCO1_4300041
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 0.851
BKCO1_5400079
Fe-s protein assembly co-chaperone.
  
 0.848
BKCO1_9000015
Heat shock protein 90.
   
 0.829
BKCO1_21000116
Putative oxidoreductase.
   
 0.829
BKCO1_11000115
Tuberous sclerosis 1 protein.
   
 0.829
BKCO1_4000055
Hsp88-like protein.
   
 0.815
BKCO1_480005
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.806
BKCO1_8000221
Response regulator.
    
 0.806
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.