STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_17000113COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family. (158 aa)    
Predicted Functional Partners:
BKCO1_2700052
Cytochrome c oxidase assembly protein subunit 17.
   
  
 0.595
BKCO1_4900041
Cytochrome c oxidase assembly protein.
   
  
 0.556
BKCO1_1500078
Mitochondrial import inner membrane translocase subunit tim10.
   
  
 0.545
BKCO1_11000110
Mrna binding protein pumilio 2.
    
   0.529
BKCO1_4000066
Mitochondrial intermembrane space import and assembly protein 40.
   
 
 0.492
BKCO1_4300078
Pumilio-family rna binding repeat protein.
    
   0.473
BKCO1_1150007
Mitochondrial inner membrane protease ATP23; Has a dual role in the assembly of mitochondrial ATPase. Belongs to the peptidase M76 family.
      
 0.424
BKCO1_1900047
Cell cycle control protein cwf18.
      
 0.424
BKCO1_1300021
Ribosomal l32p family protein.
   
    0.416
BKCO1_2700044
COX assembly mitochondrial protein; Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration; Belongs to the CMC family.
   
 
 0.411
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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