STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1500048Transcription factor bhlh protein. (518 aa)    
Predicted Functional Partners:
BKCO1_500016
Srebp cleavage activating protein.
    
 0.886
BKCO1_6200037
Patched sphingolipid transporter.
    
 0.886
BKCO1_2200082
Importin beta-1 subunit.
    
  0.835
BKCO1_2700060
Uncharacterized protein.
  
 
 0.695
BKCO1_1700077
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
  0.652
BKCO1_2700024
Hlh transcription factor.
    
 0.618
BKCO1_1500026
Helix-loop-helix dna-binding domain-containing protein.
    
 0.618
BKCO1_10005
3-hydroxy-3-methylglutaryl coenzyme A reductase.
     
 0.534
BKCO1_3700033
Uncharacterized protein.
    
 0.500
BKCO1_37000107
Dna-binding protein.
    
 0.500
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
Server load: low (16%) [HD]