STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_6000209Intracellular protein transport-like protein. (1146 aa)    
Predicted Functional Partners:
BKCO1_8000030
Serine/threonine-protein kinase.
    
 0.749
BKCO1_5400016
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.671
BKCO1_820001
Ankyrin repeat and protein kinase domain-containing protein 1.
    
 0.631
BKCO1_4300031
Autophagy-related protein.
    
  0.627
BKCO1_8000200
Phospholipid metabolism enzyme.
  
 
  0.586
BKCO1_2000086
Kinase-like protein.
    
 0.572
BKCO1_2600069
Ck1 ck1 ck1-d protein kinase; Belongs to the protein kinase superfamily.
    
 0.572
BKCO1_13000166
Armadillo-like helical protein.
  
 
   0.569
BKCO1_3700038
Spindle assembly checkpoint component mad1.
  
 
   0.566
BKCO1_4200060
Cell division-associated protein bimb.
    
 0.559
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.