STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1210006Gpi ethanolamine phosphate transferase 1. (1036 aa)    
Predicted Functional Partners:
BKCO1_730009
Gpi biosynthesis protein family pig-f.
    
 0.891
BKCO1_4000213
3-ketosphinganine reductase.
    
 0.891
BKCO1_100026
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.870
BKCO1_6900050
Mannosyltransferase.
    
 0.861
BKCO1_720002
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.785
BKCO1_600024
Glycerophosphodiester phosphodiesterase gde1.
  
 0.737
BKCO1_4800039
Gpi transamidase component gpi16.
    
 0.713
BKCO1_19000154
Had superfamily hydrolase.
    
 0.626
BKCO1_5000207
Gpi transamidase component gaa1.
   
 0.600
BKCO1_22000110
Phosphatidylinositol n-acetylglucosaminyltransferase gpi3 subunit.
     
 0.584
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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