STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1100025C6 transcription factor. (683 aa)    
Predicted Functional Partners:
BKCO1_5400038
Peroxisomal targeting signal receptor.
    
  0.683
BKCO1_2900048
Alanine-glyoxylate aminotransferase.
  
 0.677
BKCO1_100070
Ubiquitin.
    
  0.665
BKCO1_2900030
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.638
BKCO1_7100032
Peroxisomal membrane protein.
     
 0.636
BKCO1_21000138
Peroxisome biosynthesis protein (Pas10 peroxin-12).
     
 0.636
BKCO1_9900021
Malate synthase; Belongs to the malate synthase family.
   
 
 0.631
BKCO1_6900033
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
    
 0.598
BKCO1_5700050
Rrna biogenesis protein rrp5.
  
 
  0.573
BKCO1_3000041
D-lactate dehydrogenase 2.
   
 0.573
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.