STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_8000133Rta1 domain protein. (295 aa)    
Predicted Functional Partners:
BKCO1_5100059
Uracil phosphoribosyltransferase.
    
 0.593
BKCO1_11000163
Uridine kinase; Belongs to the uridine kinase family.
    
 0.593
BKCO1_300075
Uracil phosphoribosyltransferase.
    
 0.593
BKCO1_1600081
Nicotinamide riboside kinase 1.
    
 0.549
BKCO1_700096
2-dehydropantoate 2-reductase.
     
 0.511
BKCO1_900003
Uncharacterized protein.
   
  0.460
BKCO1_4400029
Uncharacterized protein.
    
  0.453
BKCO1_1200091
Serine threonine-protein kinase ppk6.
    
  0.453
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.