STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_10000154Ras gtpase activating protein. (1807 aa)    
Predicted Functional Partners:
BKCO1_900003
Uncharacterized protein.
   
 0.972
BKCO1_7000219
Myosin regulatory light chain cdc4.
    
 0.966
BKCO1_19000166
Myosin type ii heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 
 0.950
BKCO1_1900086
Cell division control protein 42.
    
 0.948
BKCO1_700054
Rho gtpase.
    
 0.940
BKCO1_1100044
Actin.
    
 0.930
BKCO1_20000104
Actin-like protein; Belongs to the actin family.
    
 0.912
BKCO1_11000104
Cytokinesis protein sepa.
    
 0.869
BKCO1_2000057
Calmodulin; Belongs to the calmodulin family.
    
 0.861
BKCO1_2500027
Calmodulin.
    
 0.861
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.