STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1010001Mss4-like protein. (256 aa)    
Predicted Functional Partners:
BKCO1_3100018
Tryptophan synthase.
    
  0.718
BKCO1_1000342
Tryptophan synthase.
    
  0.718
BKCO1_3900057
Fad binding domain-containing protein.
     
 0.712
BKCO1_3200038
Glutamate-cysteine ligase.
    
 0.588
BKCO1_18000130
Glutamate-cysteine ligase.
    
 0.588
BKCO1_4000246
Short chain dehydrogenase reductase family oxidoreductase.
   
 0.579
BKCO1_26000107
Aldehyde dehydrogenase.
   
 0.483
BKCO1_2000069
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.483
BKCO1_1140001
3-oxo-5-alpha-steroid 4-dehydrogenase.
   
 
 0.482
BKCO1_7300012
Aldo keto reductase.
   
 0.475
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.