STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_7000196Protein kinase activator bem1. (614 aa)    
Predicted Functional Partners:
BKCO1_1000141
Rho guanyl nucleotide exchange factor.
    
 0.998
BKCO1_1900086
Cell division control protein 42.
    
 0.994
BKCO1_300047
Non-specific serine/threonine protein kinase.
    
 0.983
BKCO1_1000056
Ste ste20 paka protein kinase.
    
 0.983
BKCO1_700054
Rho gtpase.
    
 0.970
BKCO1_4000040
Uncharacterized protein.
    
 0.902
BKCO1_5200061
Rho guanyl nucleotide exchange factor.
    
 0.886
BKCO1_3400066
Uncharacterized protein.
    
 0.873
BKCO1_3000022
Calcium homeostasis endoplasmic reticulum protein isoform x2.
    
 0.873
BKCO1_3300069
Cutinase.
    
 0.867
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.