STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_7300020Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
BKCO1_2500094
Cell wall protein awa1-like.
    
  0.747
BKCO1_21000122
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.677
BKCO1_400021
Gle1-like protein.
    
  0.663
BKCO1_1800039
Elongation factor 3.
    
   0.645
BKCO1_1500013
Proteophosphoglycan 5.
     
 0.644
BKCO1_4000197
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.623
BKCO1_4000018
Elongation factor 3.
    
   0.609
BKCO1_35000117
40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
   
   0.575
BKCO1_2000063
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
   0.569
BKCO1_2000155
40s ribosomal protein s14; Belongs to the universal ribosomal protein uS11 family.
   
   0.560
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.