STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_7000059Homoserine o-acetyltransferase. (516 aa)    
Predicted Functional Partners:
BKCO1_2000298
Homoserine dehydrogenase.
  
 0.950
BKCO1_7000012
Cystathionine gamma-synthase.
   
 
 0.935
BKCO1_10000152
Cystathionine gamma-synthase.
   
 
 0.898
BKCO1_7700010
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.858
BKCO1_3100018
Tryptophan synthase.
  
 
 0.830
BKCO1_2900048
Alanine-glyoxylate aminotransferase.
   
 0.808
BKCO1_1000342
Tryptophan synthase.
  
 
 0.807
BKCO1_7000058
Cystathionine beta-lyase.
   
 
 0.778
BKCO1_7900019
Threonine dehydratase.
   
 
 0.766
BKCO1_5000147
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
  0.754
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.