STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_6000228Beta-galactosidase. (1001 aa)    
Predicted Functional Partners:
BKCO1_1000213
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.822
BKCO1_5000175
Aldose 1-epimerase.
  
 
 0.822
BKCO1_500006
Aldose 1-epimerase.
  
 
 0.682
BKCO1_1000435
Choline dehydrogenase.
     
 0.669
BKCO1_1600098
Arylsulfatase; Belongs to the sulfatase family.
    
 0.657
BKCO1_3400050
Ceramide glucosyltransferase.
   
 
 0.649
BKCO1_370002
Beta-hexosaminidase.
  
 
 0.644
BKCO1_4900070
Uncharacterized protein.
   
 0.605
BKCO1_6100065
Carboxypeptidase s1; Belongs to the peptidase S10 family.
   
 0.605
BKCO1_5600025
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.605
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.