STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_5000198Endoglucanase ii. (245 aa)    
Predicted Functional Partners:
BKCO1_900003
Uncharacterized protein.
    
 0.855
BKCO1_200035
Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.
    
 0.808
BKCO1_2700070
Arginase family protein.
    
 0.649
BKCO1_2500053
Uncharacterized protein.
    
 0.649
BKCO1_6900040
Gtp-binding protein rhoa.
    
 0.639
BKCO1_2200045
Transforming protein rho.
    
 0.639
BKCO1_1900086
Cell division control protein 42.
    
 0.639
BKCO1_700054
Rho gtpase.
    
 0.639
BKCO1_2000285
Gtp-binding protein rho2.
    
 0.639
BKCO1_1000222
Gtp-binding protein rhoc.
    
 0.639
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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