BKCO1_5200042 protein (Diplodia corticola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BKCO1_5200042

Presequence translocated-associated motor subunit pam17. (285 aa)

Predicted Functional Partners:

BKCO1_1600092

0.975

BKCO1_8000173

0.964

BKCO1_13000101

0.932

BKCO1_2000139

0.892

BKCO1_4000189

0.834

BKCO1_10000171

0.832

BKCO1_7900011

0.815

BKCO1_1200059

0.815

BKCO1_4800019

0.807

BKCO1_6300056

0.804

Your Current Organism:

Diplodia corticola

NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BKCO1_10000171	BKCO1_1200059	A0A1J9R894	A0A1J9S9S3	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial chaperone.	0.851
BKCO1_10000171	BKCO1_13000101	A0A1J9R894	A0A1J9R7L0	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.991
BKCO1_10000171	BKCO1_2000139	A0A1J9R894	A0A1J9RIE9	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit tim16.	0.933
BKCO1_10000171	BKCO1_4000189	A0A1J9R894	A0A1J9RF72	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial inner membrane translocase subunit.	0.907
BKCO1_10000171	BKCO1_4800019	A0A1J9R894	A0A1J9RFT5	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit tim-17.	0.981
BKCO1_10000171	BKCO1_5200042	A0A1J9R894	A0A1J9RET8	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Presequence translocated-associated motor subunit pam17.	0.832
BKCO1_1200059	BKCO1_10000171	A0A1J9S9S3	A0A1J9R894	Mitochondrial chaperone.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.851
BKCO1_1200059	BKCO1_13000101	A0A1J9S9S3	A0A1J9R7L0	Mitochondrial chaperone.	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.976
BKCO1_1200059	BKCO1_2000139	A0A1J9S9S3	A0A1J9RIE9	Mitochondrial chaperone.	Mitochondrial import inner membrane translocase subunit tim16.	0.989
BKCO1_1200059	BKCO1_4000189	A0A1J9S9S3	A0A1J9RF72	Mitochondrial chaperone.	Mitochondrial inner membrane translocase subunit.	0.951
BKCO1_1200059	BKCO1_4800019	A0A1J9S9S3	A0A1J9RFT5	Mitochondrial chaperone.	Mitochondrial import inner membrane translocase subunit tim-17.	0.938
BKCO1_1200059	BKCO1_5200042	A0A1J9S9S3	A0A1J9RET8	Mitochondrial chaperone.	Presequence translocated-associated motor subunit pam17.	0.815
BKCO1_13000101	BKCO1_10000171	A0A1J9R7L0	A0A1J9R894	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.991
BKCO1_13000101	BKCO1_1200059	A0A1J9R7L0	A0A1J9S9S3	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial chaperone.	0.976
BKCO1_13000101	BKCO1_2000139	A0A1J9R7L0	A0A1J9RIE9	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit tim16.	0.983
BKCO1_13000101	BKCO1_4000189	A0A1J9R7L0	A0A1J9RF72	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial inner membrane translocase subunit.	0.983
BKCO1_13000101	BKCO1_4800019	A0A1J9R7L0	A0A1J9RFT5	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Mitochondrial import inner membrane translocase subunit tim-17.	0.990
BKCO1_13000101	BKCO1_5200042	A0A1J9R7L0	A0A1J9RET8	Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	Presequence translocated-associated motor subunit pam17.	0.932
BKCO1_1600092	BKCO1_5200042	A0A1J9S7R0	A0A1J9RET8	Polyphosphoinositide phosphatase.	Presequence translocated-associated motor subunit pam17.	0.975
BKCO1_1600092	BKCO1_6300056	A0A1J9S7R0	A0A1J9RCP8	Polyphosphoinositide phosphatase.	Phosphatidylinositol 3-kinase; Belongs to the PI3/PI4-kinase family.	0.931

page 1 of 3

Server load: low (20%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About