STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1000607Abc transporter pmr5; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1420 aa)    
Predicted Functional Partners:
BKCO1_11000116
Tor signaling pathway regulator.
    
 0.553
BKCO1_4800017
Cytochrome c oxidase assembly protein.
    
 0.489
BKCO1_4700040
Aamy domain-containing protein.
   
 
  0.455
BKCO1_3500055
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.454
BKCO1_800003
ATP synthase subunit gamma.
   
   0.443
BKCO1_9000020
Atp synthase subunit mitochondrial.
    
   0.432
BKCO1_1230001
Ser thr protein phosphatase family.
    
 
 0.422
BKCO1_1000170
Serine/threonine-protein phosphatase.
    
 
 0.422
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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