STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1000364Alanyl-trna synthetase. (281 aa)    
Predicted Functional Partners:
BKCO1_3000097
Anaphase-promoting complex subunit cut9.
   
 0.963
BKCO1_2200092
Anaphase-promoting complex component cut20 apc4.
   
 0.962
BKCO1_700034
Anaphase-promoting complex subunit 5.
   
 0.960
BKCO1_22000101
Anaphase promoting complex subunit 10.
    
 0.958
BKCO1_5000156
20s cyclosome subunit (Apc1).
    
 0.958
BKCO1_5000137
Anaphase-promoting complex subunit; Belongs to the cullin family.
    
 0.957
BKCO1_5900014
Bub protein kinase.
    
 0.936
BKCO1_15000141
Anaphase-promoting complex subunit 11.
    
 0.898
BKCO1_15000140
Anaphase promoting complex subunit protein.
    
 0.898
BKCO1_20000131
Mitotic spindle checkpoint component mad2.
    
 0.876
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.