STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_2000171Bzip transcription factor. (500 aa)    
Predicted Functional Partners:
BKCO1_38000113
Dna polymerase delta subunit 2.
    
 0.625
BKCO1_9700017
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.619
BKCO1_5300086
Survival motor neuron.
    
 0.606
BKCO1_6000034
DNA polymerase.
   
 0.595
BKCO1_1000108
Nadh:ubiquinone oxidoreductase kDa subunit.
   
   0.590
BKCO1_150004
Nadh:ubiquinone oxidoreductase subunit.
   
   0.590
BKCO1_800006
Nadh-ubiquinone oxidoreductase 49 kDa subunit; Belongs to the complex I 49 kDa subunit family.
   
   0.587
BKCO1_4200028
Uncharacterized protein.
   
   0.582
BKCO1_22000129
Nadh:ubiquinone oxidoreductase subunit.
   
   0.582
BKCO1_1800060
Dna excision repair protein ercc-4.
    
 0.580
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.