STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_8300036Alpha beta hydrolase fold-1 protein. (344 aa)    
Predicted Functional Partners:
BKCO1_26000148
Had superfamily.
  
 
 0.953
BKCO1_2400061
Phosphatidyl synthase.
  
 
 0.953
BKCO1_3000168
Cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.953
BKCO1_2000243
Cat eye syndrome critical region protein 5.
  
 
 0.953
BKCO1_5400038
Peroxisomal targeting signal receptor.
   
 0.908
BKCO1_21000138
Peroxisome biosynthesis protein (Pas10 peroxin-12).
   
 
  0.902
BKCO1_7100032
Peroxisomal membrane protein.
    
  0.901
BKCO1_2000170
Peroxisomal membrane anchor protein.
   
 
  0.898
BKCO1_10000155
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
   
 0.862
BKCO1_4500067
Had superfamily.
  
 
 0.838
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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