STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_10200011C-4 methyl sterol oxidase; Belongs to the sterol desaturase family. (797 aa)    
Predicted Functional Partners:
BKCO1_4600071
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.997
BKCO1_100063
3-ketosteroid reductase.
   
 0.996
BKCO1_13000112
Squalene epoxidase.
   
 
 0.991
BKCO1_6000025
C-8 sterol isomerase.
   
 0.990
BKCO1_32000115
Cytochrome family 51 (Sterol 14-demethylase); Belongs to the cytochrome P450 family.
   
 0.987
BKCO1_19000246
14-alpha sterol demethylase cyp51b; Belongs to the cytochrome P450 family.
   
 0.987
BKCO1_2700041
3-beta hydroxysteroid dehydrogenase isomerase.
   
 0.983
BKCO1_8300031
Sterol-4-alpha-carboxylate 3-dehydrogenase.
   
 0.982
BKCO1_900057
Farnesyl-diphosphate farnesyltransferase.
  
 0.981
BKCO1_8400022
Cytochrome p450 61; Belongs to the cytochrome P450 family.
   
 0.979
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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