STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_28000103Kelch domain-containing protein. (1107 aa)    
Predicted Functional Partners:
BKCO1_28000102
Mitochondrial peroxiredoxin prx1.
 
      0.745
BKCO1_1200057
Protein phosphatase pp2a regulatory subunit a.
   
 0.664
BKCO1_1600018
Vesicle-associated membrane protein 4.
     
 0.646
BKCO1_800098
Mitochondrial peroxiredoxin prx1.
 
      0.588
BKCO1_800084
Vesicular-fusion protein sec18.
    
  0.587
BKCO1_5800025
Ras-related protein.
    
  0.586
BKCO1_1200016
Ribosome-interacting gtpase 1.
    
   0.564
BKCO1_1100004
Uncharacterized protein.
    
   0.548
BKCO1_80009
Dna polymerase alpha epsilon subunit b.
    
   0.548
BKCO1_7100028
Casein kinase ii subunit alpha; Belongs to the protein kinase superfamily.
    
   0.518
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.