STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_9000012Carbohydrate esterase family 12 protein. (256 aa)    
Predicted Functional Partners:
BKCO1_19000135
Glutamine amidotransferase.
  
 0.986
BKCO1_1000178
Gmp synthase.
    
 0.704
BKCO1_1000007
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.
     
 0.676
BKCO1_4400096
Glutamate synthase.
   
 
  0.643
BKCO1_400007
NADPH:adrenodoxin oxidoreductase, mitochondrial.
    
  0.642
BKCO1_7000021
Pyridoxamine 5-phosphate oxidase.
    
 0.623
BKCO1_2000053
Gmp synthase.
    
 0.607
BKCO1_7000122
Glutamine amidotransferase-like protein.
    
 0.607
BKCO1_1000225
Class i glutamine amidotransferase-like protein.
    
 0.607
BKCO1_8900016
Glutamine synthetase.
    
 0.587
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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