STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1300089Mitochondrial 54s ribosomal protein 17 30. (340 aa)    
Predicted Functional Partners:
BKCO1_20000140
Ribosomal protein s15.
   
 
 0.994
BKCO1_2500038
Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.
   
   0.994
BKCO1_2000286
Ring finger domain protein.
   
 
 0.994
BKCO1_4000140
50s ribosomal protein l2.
   
 
 0.993
BKCO1_4000188
Mitochondrial ribosomal protein subunit s18.
   
 
 0.991
BKCO1_3200085
Ribosomal protein l15.
   
 
 0.991
BKCO1_8100016
Mitochondrial 54s ribosomal protein mrpl51.
   
 
 0.991
BKCO1_7000189
50s ribosomal protein l4.
   
 
 0.991
BKCO1_6000154
Mitochondrial 54s ribosomal protein 41.
   
 
 0.990
BKCO1_1140003
Mitochondrial 54s ribosomal protein 8; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.990
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.