Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BKCO1_1000633 | BKCO1_12000167 | A0A1J9RFH5 | A0A1J9RUK6 | Acetylserotonin methytransferase-like protein. | Ankyrin repeat protein. | 0.679 |
BKCO1_1000633 | BKCO1_4100063 | A0A1J9RFH5 | A0A1J9RXB6 | Acetylserotonin methytransferase-like protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.984 |
BKCO1_1000633 | BKCO1_480006 | A0A1J9RFH5 | A0A1J9QSR4 | Acetylserotonin methytransferase-like protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.979 |
BKCO1_1000633 | BKCO1_5000177 | A0A1J9RFH5 | A0A1J9RZN4 | Acetylserotonin methytransferase-like protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.987 |
BKCO1_1000633 | MED17 | A0A1J9RFH5 | A0A1J9REB2 | Acetylserotonin methytransferase-like protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.984 |
BKCO1_1000633 | MED6 | A0A1J9RFH5 | A0A1J9R512 | Acetylserotonin methytransferase-like protein. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.984 |
BKCO1_1000646 | BKCO1_12000167 | A0A1J9SLI7 | A0A1J9RUK6 | Allophanate hydrolase. | Ankyrin repeat protein. | 0.732 |
BKCO1_1000646 | BKCO1_970003 | A0A1J9SLI7 | A0A1J9RN53 | Allophanate hydrolase. | Urea carboxylase. | 0.947 |
BKCO1_12000167 | BKCO1_1000633 | A0A1J9RUK6 | A0A1J9RFH5 | Ankyrin repeat protein. | Acetylserotonin methytransferase-like protein. | 0.679 |
BKCO1_12000167 | BKCO1_1000646 | A0A1J9RUK6 | A0A1J9SLI7 | Ankyrin repeat protein. | Allophanate hydrolase. | 0.732 |
BKCO1_12000167 | BKCO1_1500013 | A0A1J9RUK6 | A0A1J9R5H7 | Ankyrin repeat protein. | Proteophosphoglycan 5. | 0.907 |
BKCO1_12000167 | BKCO1_2500094 | A0A1J9RUK6 | A0A1J9QYI1 | Ankyrin repeat protein. | Cell wall protein awa1-like. | 0.784 |
BKCO1_12000167 | BKCO1_4100063 | A0A1J9RUK6 | A0A1J9RXB6 | Ankyrin repeat protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.660 |
BKCO1_12000167 | BKCO1_480006 | A0A1J9RUK6 | A0A1J9QSR4 | Ankyrin repeat protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.653 |
BKCO1_12000167 | BKCO1_5000177 | A0A1J9RUK6 | A0A1J9RZN4 | Ankyrin repeat protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.675 |
BKCO1_12000167 | BKCO1_970003 | A0A1J9RUK6 | A0A1J9RN53 | Ankyrin repeat protein. | Urea carboxylase. | 0.732 |
BKCO1_12000167 | MED17 | A0A1J9RUK6 | A0A1J9REB2 | Ankyrin repeat protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.662 |
BKCO1_12000167 | MED6 | A0A1J9RUK6 | A0A1J9R512 | Ankyrin repeat protein. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.654 |
BKCO1_1500013 | BKCO1_12000167 | A0A1J9R5H7 | A0A1J9RUK6 | Proteophosphoglycan 5. | Ankyrin repeat protein. | 0.907 |
BKCO1_1500013 | BKCO1_2500094 | A0A1J9R5H7 | A0A1J9QYI1 | Proteophosphoglycan 5. | Cell wall protein awa1-like. | 0.999 |
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