STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_390008Transcription factor. (675 aa)    
Predicted Functional Partners:
BKCO1_14000123
Transcriptional activator spt7.
    
 
 0.978
BKCO1_8000195
Transcriptional co-activator.
    
 
 0.940
BKCO1_2300029
Histone acetyltransferase gcn5.
    
 
 0.939
BKCO1_3100064
Transcription initiation factor tfiid complex 60 kDa subunit.
    
 
 0.938
BKCO1_21000114
Transcription initiation factor tfiid subunit.
    
 
 0.928
BKCO1_3400043
Histone acetylase complex subunit paf400; Belongs to the PI3/PI4-kinase family.
    
 
 0.924
BKCO1_11500014
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.918
BKCO1_2100045
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.883
BKCO1_8000202
Saga-like transcriptional regulatory complex subunit.
    
 
 0.882
BKCO1_5900033
Transcription initiation factor tfiid subunit 12.
    
 
 0.881
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.