STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_3900037Ribosomal protein l24e. (906 aa)    
Predicted Functional Partners:
BKCO1_3100018
Tryptophan synthase.
    
 0.726
BKCO1_1000342
Tryptophan synthase.
    
 0.726
BKCO1_1010004
Triacylglycerol lipase.
   
 
 0.693
BKCO1_17000110
Nuclear elongation and deformation protein 1.
     
 0.691
BKCO1_3000256
Long-chain acyl-synthetase.
    
 0.689
BKCO1_3600087
Diacylglycerol o-acyltransferase 2a.
     
 0.685
BKCO1_26000148
Had superfamily.
  
 
 0.665
BKCO1_2400061
Phosphatidyl synthase.
  
 
 0.665
BKCO1_3000168
Cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.665
BKCO1_2000243
Cat eye syndrome critical region protein 5.
  
 
 0.665
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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