STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_2500029Sulfatase domain-containing protein. (970 aa)    
Predicted Functional Partners:
BKCO1_19000160
Nuclease domain-containing protein 1.
    
 0.681
BKCO1_590004
Atp-dependent rna helicase dbp3; Belongs to the DEAD box helicase family.
    
 0.469
BKCO1_15000114
Uncharacterized protein.
    
 0.469
BKCO1_1020002
Atp-dependent rna helicase dbp2; Belongs to the DEAD box helicase family.
    
 0.469
BKCO1_4000101
Pre-mrna-processing atp-dependent rna helicase prp5.
    
 0.452
BKCO1_3700033
Uncharacterized protein.
   
 
  0.442
BKCO1_37000107
Dna-binding protein.
   
 
  0.442
BKCO1_18000118
Low temperature requirement a protein.
   
 
  0.442
BKCO1_400046
RNA helicase.
    
 0.430
BKCO1_2500090
Tyrosinase.
    
 0.428
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.