STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_28000152og-fe oxygenase family oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (362 aa)    
Predicted Functional Partners:
BKCO1_1000066
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.582
BKCO1_19000162
Kinase activator.
    
 0.562
BKCO1_1000023
2og-fe oxygenase superfamily protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.481
BKCO1_1370001
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
   
 
  0.434
BKCO1_1000026
Putative 2-oxoglutarate-dependent dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.429
BKCO1_2800016
2og-fe oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.426
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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