STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_19000228Insig domain-containing protein. (473 aa)    
Predicted Functional Partners:
BKCO1_500016
Srebp cleavage activating protein.
    
 0.951
BKCO1_10005
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
 
 0.923
BKCO1_2800072
Wd40 repeat-like protein.
    
 
 0.828
BKCO1_6200037
Patched sphingolipid transporter.
   
 0.719
BKCO1_8500028
Origin recognition complex subunit.
    
   0.694
BKCO1_1250003
Male sterility protein.
    
   0.694
BKCO1_6000186
Origin recognition complex subunit 6.
    
   0.694
BKCO1_2100041
Ring finger protein.
    
 
 0.670
BKCO1_21000122
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
   
 
 0.654
BKCO1_3200044
Sterol regulatory element binding protein sre1.
    
 0.646
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.