STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_2100088Oxysterol-binding protein; Belongs to the OSBP family. (452 aa)    
Predicted Functional Partners:
BKCO1_5500028
Oxysterol binding protein; Belongs to the OSBP family.
   
0.621
BKCO1_6200037
Patched sphingolipid transporter.
   
 0.571
BKCO1_1900086
Cell division control protein 42.
    
  0.551
BKCO1_700054
Rho gtpase.
    
  0.551
BKCO1_9300017
Nad-binding domain.
   
  0.505
BKCO1_2600050
Nipsnap family protein.
   
  0.505
BKCO1_6300044
Phosphatidylinositol 3; Belongs to the PI3/PI4-kinase family.
   
 
 0.484
BKCO1_500016
Srebp cleavage activating protein.
   
 0.470
BKCO1_5300083
Msp domain-containing protein.
    
 
 0.465
BKCO1_200031
Gtp-binding protein sas1.
    
  0.464
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.