STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_19000162Kinase activator. (524 aa)    
Predicted Functional Partners:
BKCO1_2600055
Autophagy-related protein 29.
    
 0.995
BKCO1_1000066
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.988
BKCO1_3700016
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.984
BKCO1_19000192
Ulk ulk protein kinase.
   
 
 0.963
BKCO1_3300071
Autophagy related lipase atg15.
   
 
 0.947
BKCO1_3500078
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
    
   0.920
BKCO1_400017
Non-specific serine/threonine protein kinase.
    
   0.889
BKCO1_200056
Autophagy-related protein 11.
    
 
 0.884
BKCO1_6000064
Mannan endo-1,6-alpha-mannosidase.
    
 0.780
BKCO1_14000158
Mannan endo-1,6-alpha-mannosidase.
    
 0.780
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.