STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_15000113Transcription-silencing protein clr2. (703 aa)    
Predicted Functional Partners:
BKCO1_4600086
F-box domain protein.
  
     0.501
BKCO1_32000104
F-box domain-containing protein.
  
     0.485
BKCO1_200048
C6 transcription factor.
  
     0.481
BKCO1_5800028
Uncharacterized protein.
  
     0.464
BKCO1_900016
Wd and tetratricopeptide repeat protein.
  
     0.449
BKCO1_36000117
C-x8-c-x5-c-x3-h type zinc finger protein.
  
     0.436
BKCO1_1700010
Wd40 repeat-like protein.
  
     0.430
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.