STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1100057Fructosyl amine:oxygen oxidoreductase. (441 aa)    
Predicted Functional Partners:
BKCO1_3100018
Tryptophan synthase.
    
  0.688
BKCO1_1000342
Tryptophan synthase.
    
  0.688
BKCO1_6000141
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.628
BKCO1_2000314
Dash complex subunit dad4.
  
 0.622
BKCO1_19000147
Fad dependent oxidoreductase.
  
 0.622
BKCO1_1400013
Fad dependent oxidoreductase superfamily protein.
  
 0.622
BKCO1_1000381
Fad dependent oxidoreductase.
  
 0.622
BKCO1_5400038
Peroxisomal targeting signal receptor.
    
 0.611
BKCO1_2900048
Alanine-glyoxylate aminotransferase.
  
 
 0.601
BKCO1_500001
Apoptosis inducing factor.
   
 0.587
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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