STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BKCO1_1000040Udp-galactose transporter like protein. (723 aa)    
Predicted Functional Partners:
BKCO1_800097
Dna-directed rna polymerases and iii subunit rpabc1.
    
 
 0.884
BKCO1_2700045
Prefoldin subunit 2.
    
 
 0.848
BKCO1_4400026
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.809
BKCO1_500099
Prefoldin subunit 6.
    
 
 0.789
BKCO1_7800012
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.777
BKCO1_6000158
Prefoldin subunit.
    
 
 0.586
BKCO1_9000016
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 
 0.584
BKCO1_28000115
Serine/threonine-protein phosphatase.
   
 
 0.584
BKCO1_4600091
Dna-directed rna polymerase i and iii 14 kDa polypeptide.
   
   0.579
BKCO1_1600090
Dna-directed rna polymerase iii complex subunit rpc37 protein.
    
   0.571
Your Current Organism:
Diplodia corticola
NCBI taxonomy Id: 236234
Other names: Botryosphaeria corticola, Botryosphaeria corticola A.J.L.Phillips, A.Alves & J. Luque 2004, CBS 112549, D. corticola, Diplodia corticola A.J.L. Phillips, A. Alves & J. Luque 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.